Quantum-enabled EPR spectroscopy

Access the inaccessible

Static structures miss the motion that dictates biological function. FATHOM® resolves dynamic behavior.

3D protein ribbon structure with alpha helices, beta sheets, and a disordered region in purple at one end.
3D rendering of a protein ribbon structure with cyan helices and sheets and a short purple section.
HighQ Fathom deep EPR spectrometer machine with a screen displaying a graph.
The problem

Structure isn't static.

Cryo-EM, NMR spectroscopy, AlphaFold, and X-ray crystallography give you a snapshot. Biological function lives in what the snapshot misses — the loops that flex, the domains that switch, and the conformational ensembles that drive molecular binding and allosteric regulation.

The solution

Measure the motion.

FATHOM resolves nanoscale distance distributions and conformational dynamics on micromolar samples, in under a few hours, on an instrument built for the structural biology lab.

The instrument

The world's first quantum-enabled EPR spectrometer.

FATHOM measures the protein dynamics that static structural techniques can't resolve — the conformational motion behind binding, signalling, and drug action.

Our Company

Born from quantum research. Built to transform drug discovery.

High-Q Technologies emerged from the Institute for Quantum Computing at the University of Waterloo. Backed by Quantum Valley Investments and guided by scientific advisors from MIT, we are building the measurement infrastructure for the next generation of structural biology.

Three men in a lab observing a high-tech spectrometer with exposed piping on the wall.
Our News

Insights from the lab.

Explore Insights
DEER spectroscopy (DEER EPR, PELDOR)
What Is DEER Spectroscopy? How DEER EPR Measures Distances

DEER spectroscopy (double electron-electron resonance) is a pulsed EPR technique that measures the distance between two unpaired electrons, usually spin labels attached to chosen sites on a protein, across a range of roughly 1.5 to 8 nanometers. Because every molecule in the frozen sample contributes to the signal, DEER EPR returns a full distribution of distances instead of a single average, which shows how many conformations a protein adopts and how flexible it is. This article is for protein scientists and drug discovery teams deciding whether DEER fits a project. It covers how the experiment works, how DEER relates to PELDOR, the distance limits, and where DEER is used in drug discovery.

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What Is DEER Spectroscopy? How DEER EPR Measures Distances
How to Validate Protein Dimerization Using DEER EPR, AUC, and SEC-MALS
How to Validate Protein Dimerization Using Electron Paramagnetic Resonance

Protein dimerization is one of the most widespread and functionally important forms of protein–protein interaction. Proteins rarely act in isolation in a biological environment; instead, they associate as homodimers, heterodimers or higher-order oligomers to form functional assemblies. This self-assembly occurs in every cellular compartment, from membranes to the nucleus and cytosol, and regulates processes ranging from enzymatic activation and signal transduction to pathogenic pathways. A dimer observed in a crystal structure, however, may represent either a genuine biological assembly or a contact created by crystal packing. A crystal structure provides detailed information about molecular architecture, but it does not by itself establish whether two molecules associate under relevant solution conditions, how strong that interaction is, or whether the subunits retain the same arrangement outside the lattice. Distinguishing between these possibilities is therefore an important task in structural biology, biophysics and pharmaceutical research, where protein–protein interactions can influence function, stability and the binding of potential drug candidates.

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How to Validate Protein Dimerization Using Electron Paramagnetic Resonance
Protein Dimerization: Is your crystal structure dimer real? Testing protein dimers in solution
Protein Dimerization: Is your crystal structure dimer real?

Protein dimerization occurs when two protein molecules associate to form a dimer. A crystal structure can reveal how two protein molecules fit together, identifying an interface that may influence protein function or drug discovery. However, a dimer observed in a crystal does not necessarily represent the dominant assembly in solution. Crystal packing can stabilize contacts that are weak, transient, or absent under physiologically relevant conditions. For pharmaceutical researchers, this distinction matters because a proposed dimer interface may form a binding site, regulate protein activity, or provide a target for small molecules. Before using the structure to guide drug design, researchers need to establish whether the protein associates in solution and whether the arrangement of its subunits is consistent with the proposed model.

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Protein Dimerization: Is your crystal structure dimer real?
Contact

Discuss your research with our team.

Our applications scientists work directly with structural biology and drug discovery groups to understand where EPR fits within your research.

Talk to an Application Scientist

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For questions, collaborations, or support related to High Q’s technology solutions.

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